STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86988.1DNA polymerase, beta domain protein region; Identified by match to protein family HMM PF01909. (107 aa)    
Predicted Functional Partners:
AEF83867.1
HepN domain protein; Identified by match to protein family HMM PF05168.
 
     0.945
AEF84152.1
Hepn domain protein; Identified by match to protein family HMM PF05168.
 
     0.740
AEF86029.1
Conserved hypothetical protein.
       0.557
AEF85207.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR00305.
 
     0.464
AEF85290.1
Putative transcriptional regulator; Identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439.
  
     0.451
AEF84821.1
Hypothetical protein; Identified by glimmer; putative.
       0.417
AEF85469.1
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
 
     0.411
AEF86453.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.404
AEF83887.1
Identified by match to protein family HMM PF00933.
       0.403
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.