close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF81071.1Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537. (418 aa)    
Predicted Functional Partners:
AEF82118.1
Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.
 
 
 
 0.883
AEF83001.1
Phage capsid family; Identified by match to protein family HMM PF05065.
 
 
 
 0.854
AEF82640.1
Phage terminase, large subunit, PBSX family; Identified by match to protein family HMM TIGR01547.
     
 0.796
AEF83081.1
Caudovirus prohead protease; Identified by match to protein family HMM PF04586.
     
 0.795
AEF80114.1
Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196.
       0.773
AEF83272.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF80532.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF80562.1
Hypothetical protein; Identified by glimmer; putative.
  
   0.732
AEF81271.1
Putative phage tail tape measure protein lambda.
 
   
 0.615
AEF82934.1
Phage/plasmid primase, P4 family; Identified by match to protein family HMM PF08706; match to protein family HMM TIGR01613.
 
     0.576
Your Current Organism:
Treponema azotonutricium
NCBI taxonomy Id: 545695
Other names: T. azotonutricium ZAS-9, Treponema azotonutricium ZAS-9, Treponema azotonutricium str. ZAS-9, Treponema azotonutricium strain ZAS-9, Treponema sp. ZAS-9
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.