STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF82200.1Putative lipoprotein. (514 aa)    
Predicted Functional Partners:
AEF83402.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
  
 0.818
AEF82613.1
Hypothetical protein; Identified by glimmer; putative.
       0.792
AEF81351.1
Putative membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.775
AEF82952.1
Putative AcrB family membrane transport protein; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.775
AEF82164.1
Hypothetical protein; Identified by glimmer; putative.
       0.696
AEF83421.1
Treponemal membrane protein B (Antigen TmpB).
 
 
   0.691
AEF82103.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
  
     0.639
AEF83089.1
Conserved hypothetical protein.
 
     0.606
AEF80195.1
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.506
AEF82445.1
Hypothetical protein; Identified by glimmer; putative.
       0.493
Your Current Organism:
Treponema azotonutricium
NCBI taxonomy Id: 545695
Other names: T. azotonutricium ZAS-9, Treponema azotonutricium ZAS-9, Treponema azotonutricium str. ZAS-9, Treponema azotonutricium strain ZAS-9, Treponema sp. ZAS-9
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