Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF82063.1Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. (565 aa)    
Predicted Functional Partners:
AEF81089.1
Oligopeptide transport system permease protein OppB; Identified by match to protein family HMM PF00528.
 
 
 0.889
AEF81801.1
OppA1; Identified by match to protein family HMM PF00496.
 
 
 0.810
AEF81898.1
Dipeptide transport system permease protein DppC; Identified by match to protein family HMM PF00528.
 
  
 0.810
AEF81619.1
Conserved hypothetical protein.
       0.771
AEF81516.1
Putative ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.755
AEF80626.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.747
AEF82633.1
Probable peptide ABC transporter permease protein y4tP; Identified by match to protein family HMM PF00528.
 
 
 0.731
AEF83446.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.718
AEF80588.1
Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528.
 
 
 0.709
AEF80128.1
Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.
 
  
 0.649
Your Current Organism:
Treponema azotonutricium
NCBI taxonomy Id: 545695
Other names: T. azotonutricium ZAS-9, Treponema azotonutricium ZAS-9, Treponema azotonutricium str. ZAS-9, Treponema azotonutricium strain ZAS-9, Treponema sp. ZAS-9
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