STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83407.1Malate dehydrogenase; Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family. (360 aa)    
Predicted Functional Partners:
AEF82669.1
AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.
       0.693
AEF81239.1
Putative lipoprotein.
       0.506
AEF83141.1
Fumarate hydratase; Identified by match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00723.
     
 0.415
Your Current Organism:
Treponema azotonutricium
NCBI taxonomy Id: 545695
Other names: T. azotonutricium ZAS-9, Treponema azotonutricium ZAS-9, Treponema azotonutricium str. ZAS-9, Treponema azotonutricium strain ZAS-9, Treponema sp. ZAS-9
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