STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69787.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (487 aa)    
Predicted Functional Partners:
EEF66955.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.954
EEF69188.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
      0.840
EEF67416.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.771
EEF67427.1
Hypothetical protein.
  
     0.748
EEF66861.1
Hypothetical protein; KEGG: bme:BMEII0149 0.0012 extracellular serine protease; Psort location: Cytoplasmic, score: 8.87.
 
    0.683
EEF67025.1
Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.4072 1.5e-13 HYR10; similar to cell surface flocculin K01186; Psort location: Cellwall, score: 9.17.
   
    0.632
EEF69788.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: syn:sll1687 2.1e-15 hik17; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.592
EEF69740.1
N-acetylglucosaminylphosphatidylinositol deacetylase; Psort location: Cytoplasmic, score: 8.87.
  
     0.552
EEF67022.1
Transcriptional regulator, MerR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.537
EEF69272.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.513
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.