STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF69792.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (130 aa)    
Predicted Functional Partners:
EEF69795.1
Cation transport protein; KEGG: ama:AM1116 1.8e-38 trkH; potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.804
EEF69793.1
TrkA N-terminal domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.797
EEF69794.1
TrkA N-terminal domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.797
EEF69567.1
NIF3 (NGG1p interacting factor 3); Psort location: Cytoplasmic, score: 8.87.
   
    0.690
EEF69193.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
   
    0.690
EEF69162.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
   
    0.690
EEF69632.1
Hypothetical protein; KEGG: nfa:nfa16900 0.00030 sucB; putative dihydrolipoamide succinyltransferase K00658.
    
 
 0.686
EEF69584.1
Peptidase, S41 family; KEGG: dsy:DSY3259 6.4e-10 hypothetical protein K03797; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.686
EEF69507.1
Peptidase, S41 family; KEGG: lwe:lwe1870 1.4e-63 ctpA; carboxy-terminal processing protease K03797; Belongs to the peptidase S41A family.
    
 
 0.686
EEF67619.1
Immunoglobulin V-set domain protein.
    
 
 0.686
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.