STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69803.1Hypothetical protein; KEGG: chu:CHU_1556 3.0e-20 DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87. (1009 aa)    
Predicted Functional Partners:
EEF66097.1
Hypothetical protein; KEGG: mma:MM0156 1.1e-191 type IIS restriction enzyme K00571:K01155; Psort location: Cytoplasmic, score: 8.87.
  
    0.853
EEF66093.1
Restriction endonuclease; Psort location: Cytoplasmic, score: 8.87.
  
    0.823
EEF66098.1
Hypothetical protein; Psort location: Extracellular, score: 9.87.
  
    0.802
EEF68180.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.773
EEF66095.1
Hypothetical protein; KEGG: chy:CHY_2651 2.9e-253 ATP-dependent Lon protease K01338; Psort location: Cytoplasmic, score: 8.87.
  
    0.767
FbpA
Fibronectin-binding protein A domain protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.741
EEF69075.1
N-6 DNA Methylase; KEGG: gka:GK0343 9.7e-166 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit) K03427; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.732
EEF66219.1
Hypothetical protein; KEGG: sha:SH0064 3.0e-25 hsdM; type I restriction-modification system DNA methylase K03427; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.732
EEF68320.1
Myo-inositol catabolism protein IolB.
   
    0.726
EEF67222.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.722
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.