STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69682.1KEGG: lsl:LSL_1952 3.6e-17 manX; PTS system, mannose-specific IIAB component K00890; Psort location: Cytoplasmic, score: 8.87. (140 aa)    
Predicted Functional Partners:
EEF69679.1
KEGG: lsl:LSL_1949 7.1e-83 PTS system, mannose-specific IID component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
EEF69680.1
KEGG: lsl:LSL_1950 4.9e-68 PTS system, mannose-specific IIC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.973
EEF69131.1
KEGG: ecp:ECP_1762 5.0e-50 PTS system, mannose-specific IID component K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.972
EEF69681.1
KEGG: lsl:LSL_1951 5.8e-33 PTS system, mannose-specific IIAB component K00890; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.971
EEF67638.1
KEGG: lsl:LSL_1715 8.4e-25 PTS system, mannose-specific IIC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.968
EEF67639.1
PTS system mannose/fructose/sorbose family IID component; KEGG: lpl:lp_2648 3.7e-31 pts19D; N-acetylgalactosamine PTS, EIID K02747; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.968
ptsH
Phosphocarrier protein HPr; KEGG: btl:BALH_3665 9.5e-17 ptsH; phosphocarrier protein HPr K00889; Psort location: Cytoplasmic, score: 10.00.
  
 0.920
EEF69671.1
KEGG: ecp:ECP_1762 1.7e-42 PTS system, mannose-specific IID component K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.896
EEF69483.1
PTS system sorbose-specific iic component; KEGG: hso:HS_0608 1.4e-40 manY; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IIC component) K02795; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.895
EEF69484.1
PTS system, mannose/fructose/sorbose family, IID component; KEGG: hso:HS_0607 4.0e-57 manZ; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IID component) K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.888
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.