STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69635.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (65 aa)    
Predicted Functional Partners:
EEF69633.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF69634.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.4e-67 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
       0.773
EEF69636.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 5.7e-07 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF69630.1
Hypothetical protein.
       0.618
EEF69631.1
ATPase family associated with various cellular activities (AAA); KEGG: tko:TK1846 9.2e-74 MoxR-related ATPase, AAA superfamily K03924; Psort location: Cytoplasmic, score: 9.98.
       0.618
EEF69632.1
Hypothetical protein; KEGG: nfa:nfa16900 0.00030 sucB; putative dihydrolipoamide succinyltransferase K00658.
       0.618
EEF69629.1
Hypothetical protein; KEGG: syd:Syncc9605_0876 0.0085 apolipoprotein N-acyltransferase K03820; Psort location: CytoplasmicMembrane, score: 9.26.
       0.613
EEF69637.1
KEGG: pen:PSEEN3751 2.9e-63 ABC efflux transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
EEF69638.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 2.2e-79 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.555
EEF69628.1
Transglutaminase-like protein; Psort location: Cytoplasmic, score: 8.87.
       0.479
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.