STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69653.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (304 aa)    
Predicted Functional Partners:
EEF69652.1
Acetyltransferase, GNAT family; KEGG: fnu:FN1041 4.8e-14 acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.87.
     0.986
EEF69654.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.773
EEF65771.1
Glyoxalase family protein; KEGG: fnu:FN0356 1.3e-37 lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 8.87.
 
     0.744
EEF65748.1
Glutaredoxin-like protein; KEGG: aci:ACIAD3673 0.0027 putative thiol:disulfide interchange protein K03981.
  
     0.627
EEF69655.1
Hypothetical protein; KEGG: efa:EF0511 1.4e-06 nuc-1; thermonuclease precursor K01174; Psort location: Cytoplasmic, score: 8.87.
       0.624
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
 
      0.596
EEF68253.1
Hypothetical protein; KEGG: fnu:FN1387 1.5e-18 metal dependent hydrolase; Psort location: Cytoplasmic, score: 8.87.
 
    0.582
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
       0.579
EEF69657.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.579
EEF69658.1
Hypothetical protein; Displays ATPase and GTPase activities.
       0.579
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.