STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69654.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75. (111 aa)    
Predicted Functional Partners:
EEF69652.1
Acetyltransferase, GNAT family; KEGG: fnu:FN1041 4.8e-14 acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF69653.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF69655.1
Hypothetical protein; KEGG: efa:EF0511 1.4e-06 nuc-1; thermonuclease precursor K01174; Psort location: Cytoplasmic, score: 8.87.
       0.586
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
       0.538
EEF69657.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.538
EEF69658.1
Hypothetical protein; Displays ATPase and GTPase activities.
       0.538
EEF69651.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.464
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.