STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69586.1KEGG: fal:FRAAL5487 1.1e-22 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49. (294 aa)    
Predicted Functional Partners:
EEF67515.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.960
EEF68658.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.922
EEF67569.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.920
EEF65892.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.920
EEF69585.1
KEGG: bcz:BCZK3833 2.9e-15 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.910
EEF69584.1
Peptidase, S41 family; KEGG: dsy:DSY3259 6.4e-10 hypothetical protein K03797; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF69587.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEF68685.1
KEGG: bcz:BCZK3833 1.5e-11 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.770
EEF69356.1
KEGG: sma:SAV6546 1.8e-30 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.99.
    
 0.757
EEF67602.1
Receptor family ligand-binding protein.
  
 
 0.741
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.