STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69593.1Pyridoxamine 5'-phosphate oxidase family protein. (142 aa)    
Predicted Functional Partners:
EEF66464.1
KEGG: bfs:BF3395 1.0e-49 putative pyridoxine kinase K00868; Psort location: Cytoplasmic, score: 8.87.
     
  0.835
EEF69594.1
4Fe-4S binding domain protein; KEGG: dvu:DVU1944 1.7e-08 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative K00176; Psort location: Cytoplasmic, score: 8.87.
       0.625
EEF69595.1
Macro domain protein; KEGG: reh:H16_A1552 9.3e-26 predicted phosphatase homolog to the C-terminal domain of histone macroH2A1; Psort location: Cytoplasmic, score: 8.87.
       0.625
EEF69592.1
Transcriptional regulator, HxlR family.
       0.580
EEF69596.1
Hypothetical protein; KEGG: hit:NTHI1634 1.3e-10 NAD-dependent deacetylase sirtuin 5 K01463; Psort location: Cytoplasmic, score: 8.87.
 
     0.575
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.519
EEF67952.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.87.
    
   0.519
EEF66607.1
CHC2 zinc finger domain protein; KEGG: rsp:RSP_0203 0.00029 signal transduction kinase protein K07638.
  
     0.419
EEF66041.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 6.9e-22 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
    
   0.410
EEF66042.1
Rieske [2Fe-2S] domain protein; KEGG: bce:BC0399 1.4e-23 oxidoreductase.
    
   0.410
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.