STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69604.1Flavodoxin; KEGG: sbo:SBO_2185 0.00064 ycaK; hypothetical protein. (157 aa)    
Predicted Functional Partners:
EEF69601.1
Ser/Thr phosphatase family protein; KEGG: she:Shewmr4_2264 0.0062 5'-nucleotidase K01081; Psort location: Cytoplasmic, score: 8.87.
    
 0.866
EEF67355.1
Cupin domain protein; KEGG: lpl:lp_2852 6.2e-29 4-carboxymuconolactone decarboxylase (putative) K01607; Psort location: Cytoplasmic, score: 8.87.
 
     0.814
EEF68087.1
Kinase domain protein; KEGG: lsa:LSA0692 1.8e-100 putative serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.795
EEF67519.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.795
EEF66527.1
Hypothetical protein; KEGG: ago:ACR142W 3.0e-17 ACR142Wp; ser/thr/tyr protein kinase RAD53 K02831; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.795
EEF68857.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
  
   0.768
EEF68778.1
Hypothetical protein; KEGG: sil:SPO2214 8.8e-14 betC-2; choline sulfatase K01133; Psort location: Cytoplasmic, score: 8.87.
  
   0.768
EEF67711.1
Arylsulfatase; KEGG: mtu:Rv0296c 9.1e-51 probable sulfatase; Psort location: Cytoplasmic, score: 8.87.
  
   0.768
EEF66961.1
Arylsulfatase; KEGG: rba:RB4638 1.8e-63 aslA; arylsulphatase A; Psort location: Cytoplasmic, score: 9.98.
  
   0.768
EEF66354.1
Putative phage DNA packaging protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.746
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.