STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69547.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (457 aa)    
Predicted Functional Partners:
EEF69546.1
Hypothetical protein.
       0.549
EEF69548.1
Kinase, PfkB family; KEGG: bha:BH1857 1.8e-61 fructokinase K00847; Psort location: Cytoplasmic, score: 9.98.
       0.453
EEF69549.1
Hypothetical protein; KEGG: noc:Noc_0218 3.1e-50 alpha amylase, catalytic region K05343; Psort location: Cytoplasmic, score: 8.87.
       0.453
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.