STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69386.1UbiC transcription regulator-associated domain protein; KEGG: btk:BT9727_3183 6.9e-10 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87. (170 aa)    
Predicted Functional Partners:
EEF69387.1
KEGG: btk:BT9727_3183 4.3e-08 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.927
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
  0.830
EEF67644.1
KEGG: psp:PSPPH_2917 2.5e-07 DNA-binding protein K00517; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.708
EEF69094.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 3.8e-07 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567.
  
  
 0.706
EEF68517.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 8.1e-12 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.706
EEF66087.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; KEGG: hpj:jhp1037 2.0e-48 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169; Psort location: Cytoplasmic, score: 8.87.
    
  0.686
EEF66068.1
Hypothetical protein; KEGG: mja:MJ0266 1.4e-47 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170; Psort location: Cytoplasmic, score: 8.87.
    
  0.686
EEF66086.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: tma:TM0015 1.2e-20 pyruvate ferredoxin oxidoreductase, gamma subunit K00172; Psort location: Cytoplasmic, score: 8.87.
    
  0.674
EEF68979.1
UbiC transcription regulator-associated domain protein; KEGG: bcz:BCZK3111 8.0e-20 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.659
EEF67355.1
Cupin domain protein; KEGG: lpl:lp_2852 6.2e-29 4-carboxymuconolactone decarboxylase (putative) K01607; Psort location: Cytoplasmic, score: 8.87.
  
    0.658
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.