STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69363.1Hypothetical protein; KEGG: mmu:53419 0.0057 Corin; corin; Psort location: Cytoplasmic, score: 8.87. (183 aa)    
Predicted Functional Partners:
EEF65856.1
Efflux transporter, RND family, MFP subunit; KEGG: ptr:470307 1.0e-07 ROCK2, LOC470307; Rho-associated, coiled-coil containing protein kinase 2 K04514; Psort location: Extracellular, score: 7.62; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.993
EEF68421.1
RND transporter, HAE1/HME family, permease protein; KEGG: eci:UTI89_C2351 1.4e-71 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.986
EEF67025.1
Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.4072 1.5e-13 HYR10; similar to cell surface flocculin K01186; Psort location: Cellwall, score: 9.17.
  
 0.985
EEF66769.1
ABC transporter, permease protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.853
EEF65727.1
KEGG: pen:PSEEN3665 0.0013 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.819
EEF65695.1
Hypothetical protein.
  
 
 0.819
EEF69548.1
Kinase, PfkB family; KEGG: bha:BH1857 1.8e-61 fructokinase K00847; Psort location: Cytoplasmic, score: 9.98.
    
  0.813
EEF68799.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.783
EEF67139.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.783
EEF67027.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.2e-46 ATPase K06020; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.783
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.