STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69375.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (305 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
  0.942
EEF67226.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.927
EEF66939.1
KEGG: tde:TDE2512 2.4e-123 aldehyde dehydrogenase (NADP) family protein K00128; Psort location: Cytoplasmic, score: 9.98.
  
 0.922
EEF65834.1
KEGG: mhj:MHJ_0219 4.3e-115 putative methylmalonate-semialdehyde dehydrogenase K00140; Psort location: Cytoplasmic, score: 9.98.
  
 0.922
EEF68359.1
Metalloenzyme superfamily; KEGG: eci:UTI89_C3878 5.1e-96 yhfW; hypothetical protein YhfW K01618; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.917
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
 
 0.900
EEF68537.1
Hypothetical protein; KEGG: cpr:CPR_2124 1.2e-34 ptsG; PTS system, glucose-specific IIBC component K02778:K02779; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.899
pgi
KEGG: gka:GK2924 2.7e-131 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
  
 
 0.887
EEF69779.1
Hypothetical protein; KEGG: lac:LBA1707 7.8e-20 beta-glucoside permease K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.852
EEF69780.1
Phosphotransferase system, EIIB; KEGG: spr:spr0505 1.5e-48 PTS-EII; phosphotransferase system sugar-specific EII component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.852
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.