STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69381.1Putative peptidoglycan binding domain protein; KEGG: bcl:ABC1351 0.00011 xlyA; N-acetylmuramoyl-L-alanine amidase K01447. (263 aa)    
Predicted Functional Partners:
EEF65959.1
Putative peptidoglycan binding domain protein; KEGG: bli:BL01582 1.0e-08 blyAB; N-acetylmuramoyl-L-alanine amidase K01447.
 
  
  0.777
EEF69380.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF68045.1
Beta-lactamase; KEGG: bcz:BCZK2916 1.2e-55 pbp; penicillin-binding protein K01467; Psort location: Extracellular, score: 8.10.
  
 
 0.770
EEF68870.1
KEGG: pac:PPA0454 3.6e-21 transaldolase K00616; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.759
EEF65812.1
YihY family protein; KEGG: ctc:CTC02522 2.1e-12 ribonuclease BN; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.743
EEF67496.1
N-acetylmuramoyl-L-alanine amidase; KEGG: bcl:ABC0192 3.3e-30 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
    
 0.738
EEF66813.1
KEGG: bce:BC0896 2.4e-20 S-layer protein / peptidoglycan endo-beta-N-acetylglucosaminidase K01238.
    
 0.737
pgi
KEGG: gka:GK2924 2.7e-131 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
  
 
 0.735
EEF67246.1
N-terminal ig-like domain of cellulase; KEGG: sus:Acid_2606 4.4e-83 cellulase K01179.
   
 
 0.730
EEF67140.1
Haloacid dehalogenase-like hydrolase; KEGG: eci:UTI89_C4247 3.5e-07 yidA; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.724
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.