STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69349.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
EEF69348.1
KEGG: ctc:CTC01847 6.5e-148 fumarate reductase flavoprotein subunit K00244; Psort location: Cytoplasmic, score: 8.87; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.631
EEF69346.1
Response regulator receiver domain protein; KEGG: rru:Rru_A0376 8.5e-16 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 9.98.
       0.445
EEF69347.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 3.0e-100 yesM; two-component sensor kinase YesM K07718; Psort location: Cytoplasmic, score: 8.87.
       0.445
EEF69345.1
Hypothetical protein.
       0.432
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.