STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69352.1Glycerate kinase; KEGG: tde:TDE0208 1.7e-40 glxK; glycerate kinase K00865; Psort location: Cytoplasmic, score: 8.87. (213 aa)    
Predicted Functional Partners:
EEF69351.1
Hypothetical protein; KEGG: psb:Psyr_3115 9.8e-18 glycerate kinase K00865; Psort location: Cytoplasmic, score: 8.87.
     0.968
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
    0.909
EEF69350.1
Glycerate kinase; KEGG: bth:BT1437 5.0e-09 glycerate kinase K00865; Psort location: Cytoplasmic, score: 8.87.
 
     0.871
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
 
 0.826
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
    
 0.811
EEF68613.1
KEGG: ecc:c3880 1.9e-89 yhaE; 2-hydroxy-3-oxopropionate reductase K00042; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.768
EEF66797.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; KEGG: cpf:CPF_0381 1.3e-76 garR; 2-hydroxy-3-oxopropionate reductase K00042.
 
 
 0.768
EEF66939.1
KEGG: tde:TDE2512 2.4e-123 aldehyde dehydrogenase (NADP) family protein K00128; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.766
EEF65834.1
KEGG: mhj:MHJ_0219 4.3e-115 putative methylmalonate-semialdehyde dehydrogenase K00140; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.766
EEF67226.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.749
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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