STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69325.14Fe-4S binding domain protein; KEGG: pfu:PF0967 0.00026 pyruvate ferredoxin oxidoreductase, delta subunit K00171; Psort location: Cytoplasmic, score: 8.87. (250 aa)    
Predicted Functional Partners:
EEF67834.1
Hydrogenase, Fe-only; KEGG: tte:TTE0894 3.3e-165 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; Psort location: Cytoplasmic, score: 8.87.
   
 0.984
EEF69323.1
4Fe-4S binding domain protein; KEGG: sso:SSO11071 1.0e-07 porD-2; pyruvate ferredoxin oxidoreductase, delta subunit K00171; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.968
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.967
EEF67833.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 4.1e-229 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; Psort location: Cytoplasmic, score: 9.98.
    
 0.942
EEF67832.1
Respiratory-chain NADH dehydrogenase 24 Kd subunit; KEGG: bth:BT0123 2.9e-31 NADH-ubiquinone oxidoreductase subunit K00334; Psort location: Cytoplasmic, score: 9.65.
   
 0.934
EEF67155.1
Hypothetical protein; KEGG: tma:TM1426 1.2e-07 NADH dehydrogenase I chain G K00336.
   
 0.934
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
 0.895
EEF66086.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: tma:TM0015 1.2e-20 pyruvate ferredoxin oxidoreductase, gamma subunit K00172; Psort location: Cytoplasmic, score: 8.87.
    
 0.895
iadA
Beta-aspartyl peptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.
  
 0.895
EEF67156.1
Iron only hydrogenase large subunit domain protein; KEGG: ctc:CTC02417 6.2e-52 periplasmic [Fe] hydrogenase 1 K00533; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.890
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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