STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69300.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 2.6e-76 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49. (337 aa)    
Predicted Functional Partners:
EEF69299.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 3.1e-34 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.98.
 0.995
EEF69304.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 6.6e-46 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
  
 0.988
EEF69308.1
Response regulator receiver domain protein; KEGG: syn:slr2099 1.1e-16 hik40; two-component hybrid histidine kinase K02486; Psort location: Cytoplasmic, score: 9.98.
 
 0.986
EEF66982.1
KEGG: rha:RHA1_ro05622 4.3e-28 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.98.
 0.978
EEF69295.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.6e-75 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.959
EEF67123.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.959
EEF66491.1
Response regulator receiver domain protein; KEGG: bha:BH3787 4.5e-07 spo0F; two-component response regulator K02490; Psort location: Cytoplasmic, score: 8.87.
  
 0.956
EEF69297.1
PAS domain S-box protein; KEGG: mag:amb1110 1.1e-64 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
   
0.954
EEF66979.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.944
EEF69305.1
PAS domain S-box protein; KEGG: ret:RHE_PF00222 5.0e-08 probable two-component sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.87.
   
 0.943
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.