STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69226.1Hypothetical protein; Probably functions as a manganese efflux pump. (170 aa)    
Predicted Functional Partners:
EEF69225.1
Putative dihydroxyacetone kinase regulator.
       0.784
EEF69224.1
Hypothetical protein.
       0.762
mntP
Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
  
     0.698
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.667
EEF69227.1
Hypothetical protein.
       0.553
EEF69228.1
Putative Hsp20 family chaperone; Belongs to the small heat shock protein (HSP20) family.
     
 0.516
EEF69223.1
AICARFT/IMPCHase bienzyme; KEGG: xtr:448061 1.4e-118 atic; 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase K00602:K01492; Psort location: Cytoplasmic, score: 8.87.
       0.495
pyk
Pyruvate kinase; KEGG: bha:BH3163 1.5e-119 pykA; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.87.
   
   0.477
EEF68988.1
DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
    
   0.476
EEF66915.1
KEGG: ctc:CTC00824 6.0e-134 aspartate ammonia-lyase, aspartase K01744; Psort location: Cytoplasmic, score: 9.98.
    
   0.476
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.