STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69182.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75. (178 aa)    
Predicted Functional Partners:
EEF69180.1
PTS system sorbose-specific iic component; KEGG: hso:HS_0608 6.8e-23 manY; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IIC component) K02795; Psort location: CytoplasmicMembrane, score: 10.00.
       0.705
EEF69181.1
KEGG: lsl:LSL_1949 4.3e-37 PTS system, mannose-specific IID component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
       0.705
EEF69179.1
KEGG: efa:EF1804 4.1e-16 PTS system, IIB component K02794.
       0.559
EEF69183.1
KEGG: sth:STH1940 2.7e-19 PTS system, mannose-specific IIA component K02793; Psort location: Cytoplasmic, score: 8.87.
       0.489
EEF69184.1
MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.411
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.