STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF69050.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
EEF69049.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: fnu:FN1128 2.8e-120 acylamino-acid-releasing enzyme K01303; Psort location: Cytoplasmic, score: 8.87.
       0.554
EEF69051.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.547
EEF69047.1
MlrC domain protein; KEGG: reh:H16_A1780 3.8e-25 uncharacterized conserved protein containing translation initiation inhibitory endoribonuclease domain; Psort location: Cytoplasmic, score: 8.87.
       0.431
EEF69048.1
Hypothetical protein.
       0.431
EEF69052.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.418
EEF69045.1
MlrC domain protein; KEGG: reh:H16_A1780 2.9e-34 uncharacterized conserved protein containing translation initiation inhibitory endoribonuclease domain; Psort location: Cytoplasmic, score: 8.87.
       0.407
EEF69046.1
MlrC domain protein; KEGG: reh:H16_A1780 2.7e-30 uncharacterized conserved protein containing translation initiation inhibitory endoribonuclease domain; Psort location: Cytoplasmic, score: 8.87.
       0.407
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.