STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68870.1KEGG: pac:PPA0454 3.6e-21 transaldolase K00616; Psort location: Cytoplasmic, score: 8.87. (350 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.969
EEF68872.1
Ketose-bisphosphate aldolase; KEGG: lmf:LMOf2365_2167 5.7e-81 fructose-bisphosphate aldolase, class II family K01624; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.964
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.961
pgi
KEGG: gka:GK2924 2.7e-131 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
  
 
 0.940
EEF68844.1
Epimerase; KEGG: sec:SC1613 2.9e-31 sgcE; putative ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 8.87.
  
 0.915
rpe
KEGG: lwe:lwe1837 8.2e-50 rpe; ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
  
 0.915
gap
KEGG: fth:FTH_1121 1.8e-125 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.913
eno
Enolase domain protein; KEGG: efa:EF1961 6.5e-105 eno; enolase K01689; Psort location: Cytoplasmic, score: 9.98.
   
 0.906
eno-2
Enolase, C-terminal TIM barrel domain protein; KEGG: gme:Gmet_2372 1.7e-58 enolase K01689; Psort location: Cytoplasmic, score: 9.98.
   
 0.906
EEF69506.1
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; KEGG: pfu:PF0370 4.0e-14 2-hydroxyacid dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.898
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.