STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojSporulation initiation inhibitor protein Soj; KEGG: cch:Cag_1803 4.4e-67 ATPase, ParA family K03496. (264 aa)    
Predicted Functional Partners:
EEF68931.1
ParB-like protein; KEGG: pub:SAR11_0354 9.4e-49 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
 
 0.998
EEF68933.1
ParB-like protein; KEGG: pub:SAR11_0354 8.0e-36 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
 
 0.995
EEF67469.1
ParB-like protein; KEGG: pub:SAR11_0354 7.9e-08 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
 
 0.965
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.860
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.821
EEF67667.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.761
EEF67257.1
TIGR02677 family protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.761
EEF66346.1
Collagen triple helix repeat protein; KEGG: gga:418942 2.2e-25 LOC418942; similar to Mitochondrial intermediate peptidase K01410.
  
 
 0.761
EEF66348.1
Putative protein BclA; KEGG: gga:418942 1.2e-21 LOC418942; similar to Mitochondrial intermediate peptidase K01410.
  
 
 0.761
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.741
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.