STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68950.1Hypothetical protein; KEGG: ctc:CTC00811 6.5e-12 fumarate reductase flavoprotein subunit precursor K00244. (109 aa)    
Predicted Functional Partners:
EEF68949.1
FAD binding domain protein; KEGG: efa:EF2556 1.0e-51 fumarate reductase flavoprotein subunit precursor, putative K00244; Psort location: Cytoplasmic, score: 8.87.
  
 0.983
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 0.977
EEF67833.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 4.1e-229 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; Psort location: Cytoplasmic, score: 9.98.
  
 0.953
EEF66041.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 6.9e-22 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 0.929
EEF66042.1
Rieske [2Fe-2S] domain protein; KEGG: bce:BC0399 1.4e-23 oxidoreductase.
  
 0.929
EEF66654.1
KEGG: mta:Moth_1122 3.0e-107 citrate (Si)-synthase K01647; Psort location: Cytoplasmic, score: 9.98.
  
 0.926
EEF65769.1
KEGG: ctc:CTC01488 2.8e-104 fumarate reductase flavoprotein subunit K00244; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.917
EEF66086.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: tma:TM0015 1.2e-20 pyruvate ferredoxin oxidoreductase, gamma subunit K00172; Psort location: Cytoplasmic, score: 8.87.
  
 0.916
EEF67755.1
FAD binding domain protein; KEGG: lpl:lp_0055 2.0e-119 fumarate reductase, flavoprotein subunit precursor K00238; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.907
EEF66087.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; KEGG: hpj:jhp1037 2.0e-48 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.904
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.