STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68835.1Transketolase, thiamine diphosphate binding domain protein; KEGG: cno:NT01CX_1267 1.1e-84 transketolase, N-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87. (271 aa)    
Predicted Functional Partners:
EEF68834.1
Transketolase, pyridine binding domain protein; KEGG: cno:NT01CX_1268 6.3e-91 transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87.
 0.999
EEF67771.1
Transketolase, pyridine binding domain protein; KEGG: cpf:CPF_0293 8.1e-98 putative transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.87.
 0.999
rpe
KEGG: lwe:lwe1837 8.2e-50 rpe; ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
 
 0.992
EEF68844.1
Epimerase; KEGG: sec:SC1613 2.9e-31 sgcE; putative ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.970
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.932
rpiB
KEGG: gka:GK3371 4.1e-39 ribose 5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.915
pgi
KEGG: gka:GK2924 2.7e-131 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
    
 0.881
EEF68537.1
Hypothetical protein; KEGG: cpr:CPR_2124 1.2e-34 ptsG; PTS system, glucose-specific IIBC component K02778:K02779; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.864
EEF69553.1
Transaldolase; KEGG: pac:PPA0454 1.0e-67 transaldolase K00616; Psort location: Cytoplasmic, score: 8.87.
    
 0.863
EEF69779.1
Hypothetical protein; KEGG: lac:LBA1707 7.8e-20 beta-glucoside permease K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.859
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.