STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF68787.1Aminotransferase, class I/II; KEGG: yps:YPTB3432 8.1e-114 putative aminotransferase K00812; Psort location: Cytoplasmic, score: 8.87. (403 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.934
EEF68789.1
YheO-like protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.900
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.882
pdxB
KEGG: hma:rrnAC0362 1.3e-35 serA4; phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98.
 
 0.866
pdxB-2
4-phosphoerythronate dehydrogenase; KEGG: tbd:Tbd_0950 1.6e-101 D-isomer specific 2-hydroxyacid dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98.
  
 0.857
EEF66501.1
Putative isocitrate dehydrogenase, NAD-dependent; KEGG: bba:Bd1264 1.9e-98 leuB; 3-isopropylmalate dehydrogenase K00052; Psort location: Cytoplasmic, score: 9.98.
 
 0.857
coaBC
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
 0.852
EEF67226.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.845
EEF66939.1
KEGG: tde:TDE2512 2.4e-123 aldehyde dehydrogenase (NADP) family protein K00128; Psort location: Cytoplasmic, score: 9.98.
  
 0.844
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 0.844
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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