STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68753.1Response regulator receiver domain protein; KEGG: aci:ACIAD0627 5.5e-28 baeR; transcriptional regulator protein (OmpR family),response regulator in two-component regulatory system with BaeS, regulates RNA synthesis K07664; Psort location: Cytoplasmic, score: 9.98. (225 aa)    
Predicted Functional Partners:
EEF68754.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bld:BLi00316 9.0e-44 hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.995
EEF69305.1
PAS domain S-box protein; KEGG: ret:RHE_PF00222 5.0e-08 probable two-component sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.977
EEF69295.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.6e-75 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.977
EEF69297.1
PAS domain S-box protein; KEGG: mag:amb1110 1.1e-64 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.977
EEF66046.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lsl:LSL_0206 1.6e-27 baeS; two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
EEF68800.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_0295 2.4e-34 sensor histidine kinase; Psort location: Cytoplasmic, score: 9.36.
 
 0.968
EEF68635.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gka:GK2731 4.8e-41 two-component sensor histidine kinase (phosphate regulation) K07636; Psort location: CytoplasmicMembrane, score: 9.49.
 0.965
EEF67584.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; KEGG: vfi:VF0087 3.6e-38 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
  
 0.964
EEF68818.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btk:BT9727_1192 6.9e-37 resE; sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 0.962
EEF66838.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sar:SAR1771 2.2e-47 phoR; alkaline phosphatase synthesis sensor protein K07636; Psort location: CytoplasmicMembrane, score: 9.49.
 0.961
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.