STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68686.1KEGG: hpa:HPAG1_1162 1.9e-43 ABC transporter, ATP-binding protein K06022; Psort location: CytoplasmicMembrane, score: 9.49. (237 aa)    
Predicted Functional Partners:
EEF68685.1
KEGG: bcz:BCZK3833 1.5e-11 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.969
EEF67515.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.960
EEF68658.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.921
EEF67569.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.920
EEF65892.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.920
EEF68687.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.852
EEF67243.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.770
EEF67622.1
KEGG: reh:H16_A0776 4.2e-69 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.767
EEF69356.1
KEGG: sma:SAV6546 1.8e-30 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.99.
    
 0.757
EEF67621.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 2.9e-86 ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.752
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.