STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68670.1Hypothetical protein. (861 aa)    
Predicted Functional Partners:
EEF68668.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.952
EEF68671.1
Hypothetical protein.
  
 0.947
EEF68674.1
Hypothetical protein; KEGG: bpm:BURPS1710b_A1152 0.0032 carbamoyl-phosphate synthase L chain, ATP binding domain protein K01946; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.883
EEF68644.1
Antirestriction protein ArdA; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.854
EEF68638.1
NlpC/P60 family protein; KEGG: bat:BAS5084 9.2e-17 N-acetylmuramoyl-L-alanine amidase, C-terminus K01446; Psort location: CytoplasmicMembrane, score: 8.64.
  
 0.851
EEF68713.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.848
EEF66608.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.848
EEF67476.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.846
EEF68669.1
MT-A70; KEGG: spj:MGAS2096_Spy1128 2.9e-54 adenine-specific methyltransferase K00571; Psort location: Cytoplasmic, score: 8.87; Belongs to the MT-A70-like family.
  
    0.821
EEF66516.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.819
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.