STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68530.1Diguanylate cyclase (GGDEF) domain protein; KEGG: mca:MCA1246 2.5e-54 methyltransferase CheR, putative K03412:K00575; Psort location: CytoplasmicMembrane, score: 7.80. (721 aa)    
Predicted Functional Partners:
EEF68413.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: bpm:BURPS1710b_A1493 5.7e-20 GGDEF domain protein; Psort location: Cytoplasmic, score: 8.87.
 0.999
EEF67023.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: wsu:WS0975 2.7e-25 cheA; hybrid histidine kinase K03407; Psort location: Cytoplasmic, score: 8.87.
 0.999
EEF69305.1
PAS domain S-box protein; KEGG: ret:RHE_PF00222 5.0e-08 probable two-component sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.87.
 0.997
EEF69308.1
Response regulator receiver domain protein; KEGG: syn:slr2099 1.1e-16 hik40; two-component hybrid histidine kinase K02486; Psort location: Cytoplasmic, score: 9.98.
 
 0.996
EEF69304.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 6.6e-46 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
 
0.996
EEF69295.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.6e-75 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
 0.995
EEF69297.1
PAS domain S-box protein; KEGG: mag:amb1110 1.1e-64 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
 0.995
EEF67584.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; KEGG: vfi:VF0087 3.6e-38 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
 
0.994
EEF67586.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: eci:UTI89_C1612 4.6e-20 ydaM; hypothetical protein YdaM; Psort location: Cytoplasmic, score: 8.87.
 0.990
EEF65926.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tcx:Tcr_2180 5.2e-64 PAS/PAC sensor hybrid histidine kinase K07679; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.980
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.