STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68448.1Transcriptional regulator, AraC family; KEGG: bce:BC3740 0.0018 ADA regulatory protein K00567; Psort location: Cytoplasmic, score: 8.87. (441 aa)    
Predicted Functional Partners:
EEF67756.1
KEGG: bcz:BCZK3497 4.0e-10 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.893
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.860
EEF69094.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 3.8e-07 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567.
 
 
 0.852
EEF68517.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 8.1e-12 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.845
EEF67001.1
Response regulator receiver domain protein; KEGG: bur:Bcep18194_B2520 2.8e-14 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.803
EEF68504.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 8.5e-87 yesM; two-component sensor kinase YesM K07718; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.791
EEF67000.1
HAMP domain protein; KEGG: gka:GK1912 3.4e-40 two-component sensor histidine kinase K07718; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.789
EEF69347.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 3.0e-100 yesM; two-component sensor kinase YesM K07718; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.781
EEF68505.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 6.7e-16 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.780
EEF65882.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 1.1e-15 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; Psort location: Cytoplasmic, score: 9.65.
  
     0.758
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.