STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68359.1Metalloenzyme superfamily; KEGG: eci:UTI89_C3878 5.1e-96 yhfW; hypothetical protein YhfW K01618; Psort location: Cytoplasmic, score: 8.87. (407 aa)    
Predicted Functional Partners:
EEF68356.1
KEGG: oih:OB3149 8.3e-05 alanine racemase K01775; Psort location: Cytoplasmic, score: 8.87.
  
 0.987
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.970
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 
 0.966
deoD
KEGG: ftl:FTL_1461 2.9e-63 purine nucleoside phosphorylase K03784; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.965
EEF68355.1
Phosphotriesterase family protein; KEGG: eci:UTI89_C3877 4.3e-44 yhfV; phosphotriesterase-like protein; Psort location: Cytoplasmic, score: 8.87.
     0.960
EEF68358.1
Hypothetical protein; KEGG: reh:H16_B1515 8.7e-08 sufS; cysteine desulfurase (SufS) K04487; Psort location: Cytoplasmic, score: 8.87.
 
     0.940
EEF69375.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.917
EEF68353.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.911
EEF68354.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.902
EEF68349.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
     0.898
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.