STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68096.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (154 aa)    
Predicted Functional Partners:
EEF69454.1
Isoamylase N-terminal domain protein; KEGG: bce:BC4867 1.7e-36 glycogen branching enzyme K00700; Psort location: Cytoplasmic, score: 8.87.
  
 0.949
glgB
KEGG: bar:GBAA5123 1.0e-122 glgB; 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.87.
  
 0.949
glgP
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.921
rfbB
KEGG: ljo:LJ1049 6.1e-132 dTDP-D-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.87; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.900
glf
KEGG: msu:MS0661 3.7e-134 glf; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.881
glf-2
KEGG: pat:Patl_3069 3.8e-100 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.881
EEF67952.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.880
EEF69489.1
Hypothetical protein; KEGG: hma:rrnAC3232 7.5e-11 graD4c; glucose-1-phosphate thymidylyltransferase K00973; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.871
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.871
EEF66044.1
Hypothetical protein; KEGG: pac:PPA2288 0.00050 glucose-1-phosphate thymidylyltransferase K00973; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.871
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.