STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF68061.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (122 aa)    
Predicted Functional Partners:
EEF68062.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.945
EEF68060.1
Hypothetical protein.
       0.746
EEF68063.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.553
EEF68059.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.514
EEF69801.1
Transporter, major facilitator family protein; KEGG: bma:BMAA1647 1.8e-15 diaminobutyrate--pyruvate aminotransferase/membrane protein, putative K00836; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.422
EEF67163.1
Transporter, major facilitator family protein; KEGG: bps:BPSS1635 2.9e-17 probable class III aminotransferase K00836; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.419
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.