STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67991.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (304 aa)    
Predicted Functional Partners:
EEF67992.1
Hypothetical protein.
       0.773
yabP
Sporulation protein YabP.
 
   
 0.771
EEF66619.1
Transporter gate domain protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.733
EEF66835.1
Putative sporulation protein YqfD.
 
   
 0.730
EEF66184.1
Putative stage V sporulation protein B; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.700
spoIIP
Stage II sporulation protein P (SpoIIP).
  
   
 0.686
EEF67846.1
Putative phage tail component domain protein.
  
     0.676
EEF66074.1
Hypothetical protein.
  
     0.661
EEF66382.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97.
  
   
 0.643
EEF66419.1
STAS domain protein; KEGG: ava:Ava_0744 0.0079 anti-sigma-factor antagonist (STAS) and sugar transfersase K00996; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.629
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.