STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67859.1KEGG: bcz:BCZK3833 8.8e-14 transcriptional regulator, GntR family; Psort location: Cytoplasmic, score: 8.87. (124 aa)    
Predicted Functional Partners:
EEF67860.1
KEGG: hpa:HPAG1_1162 1.6e-28 ABC transporter, ATP-binding protein K06022; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.973
EEF67861.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.900
EEF68890.1
KEGG: hpa:HPAG1_1162 8.9e-21 ABC transporter, ATP-binding protein K06022; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.873
EEF68687.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.732
EEF67862.1
Histidinol phosphate phosphatase HisJ family; KEGG: tte:TTE2610 1.0e-26 his2.2; histidinol phosphatase and related hydrolases of the PHP family K04486; Psort location: Cytoplasmic, score: 8.87.
       0.693
EEF67399.1
Helicase C-terminal domain protein; KEGG: chu:CHU_1468 4.5e-11 dpn; possible adenine-specific DNA methylase K00599; Psort location: Extracellular, score: 7.50.
   
    0.648
EEF67858.1
Hypothetical protein.
       0.532
EEF69596.1
Hypothetical protein; KEGG: hit:NTHI1634 1.3e-10 NAD-dependent deacetylase sirtuin 5 K01463; Psort location: Cytoplasmic, score: 8.87.
  
    0.521
cobB
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
    0.521
EEF67863.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.480
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.