STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cvpACvpA family protein; Psort location: CytoplasmicMembrane, score: 9.99. (225 aa)    
Predicted Functional Partners:
EEF66581.1
KEGG: fnu:FN0990 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.988
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
  
 0.894
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
     
 0.828
purM
KEGG: lwe:lwe1785 3.0e-116 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 8.87.
   
  
 0.810
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.807
EEF66066.1
YbbR-like protein.
  
    0.789
EEF67958.1
Putative septation ring formation regulator EzrA; KEGG: dre:317747 2.6e-08 rock2; rho-associated, coiled-coil containing protein kinase 2 K04514; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.782
EEF66177.1
Hypothetical protein; KEGG: lwe:lwe2040 1.5e-09 cell division protein DivIVA K01549.
 
     0.773
EEF69465.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.772
EEF68016.1
ABC transporter, substrate-binding protein.
 
     0.759
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.