STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67827.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (320 aa)    
Predicted Functional Partners:
EEF67831.1
ABC transporter, permease protein; KEGG: lwe:lwe0999 1.3e-05 gbuB; glycine betaine/L-proline ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.990
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.951
EEF65926.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tcx:Tcr_2180 5.2e-64 PAS/PAC sensor hybrid histidine kinase K07679; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.933
EEF69574.1
Hypothetical protein; KEGG: ctc:CTC01847 3.2e-09 fumarate reductase flavoprotein subunit K00244.
  
 
 0.907
EEF68637.1
Flavocytochrome c; KEGG: lpl:lp_3491 1.3e-92 fumarate reductase, flavoprotein subunit precursor K00244.
  
 
 0.907
EEF68721.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.905
EEF68651.1
Bacterial mobilization protein MobC.
  
 
 0.905
EEF67401.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.905
EEF66558.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.905
EEF66530.1
Bacterial mobilization protein MobC.
  
 
 0.905
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.