STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67806.1Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 2.4e-36 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.87. (355 aa)    
Predicted Functional Partners:
EEF67272.1
KEGG: cyb:CYB_0649 1.4e-30 dolichyl-phosphate-mannose-protein mannosyltransferase K00728; Psort location: CytoplasmicMembrane, score: 9.97.
  
 0.872
EEF67805.1
Nucleotide sugar dehydrogenase; KEGG: spr:spr0318 5.6e-170 cps2K; UDPglucose 6-dehydrogenase K00012.
  
  
 0.847
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: hso:HS_1532 9.4e-33 conserved hypothetical protein K03273; Psort location: Cytoplasmic, score: 8.87.
  
 0.847
EEF67952.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.844
EEF67273.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.808
EEF67807.1
Hypothetical protein.
       0.773
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.764
EEF67269.1
GtrA-like protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.761
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.761
mprF
Gram-positive signal peptide protein, YSIRK family; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
 
 0.749
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.