STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67721.1Creatinase; KEGG: cpr:CPR_2506 2.1e-76 metallopeptidase, family M24 K01271; Psort location: Cytoplasmic, score: 8.87; Belongs to the peptidase M24B family. (351 aa)    
Predicted Functional Partners:
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
 
  0.910
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.816
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.798
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.793
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.789
pepD
Xaa-His dipeptidase; KEGG: bca:BCE_2527 3.9e-82 pepD; aminoacyl-histidine dipeptidase K01270; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.777
EEF67720.1
Hypothetical protein; KEGG: ctc:CTC01157 2.9e-05 phosphoesterase; Psort location: CytoplasmicMembrane, score: 9.26.
       0.773
EEF67723.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.757
EEF66041.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 6.9e-22 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 0.757
EEF66042.1
Rieske [2Fe-2S] domain protein; KEGG: bce:BC0399 1.4e-23 oxidoreductase.
  
 0.757
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.