STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67600.1Branched-chain amino acid ABC transporter, permease protein; KEGG: reh:H16_A3653 1.2e-29 ABC-type transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (320 aa)    
Predicted Functional Partners:
EEF67598.1
KEGG: reh:H16_A3026 5.0e-66 livF2; ABC-type transporter, ATPase component: HAAT family; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.999
EEF67599.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5827 2.3e-61 ABC branched-chain amino acid family transporter, ATPase subunit K01995; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.999
EEF67601.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: rha:RHA1_ro10323 5.3e-22 ABC branched chain amino acid transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EEF67602.1
Receptor family ligand-binding protein.
 
 
 0.999
EEF65922.1
ABC transporter, ATP-binding protein; KEGG: ctc:CTC00861 2.9e-173 mglA; galactoside transport ATP-binding protein mglA K02056; Psort location: CytoplasmicMembrane, score: 9.49.
   
 0.941
EEF65752.1
KEGG: afu:AF1021 2.0e-32 ABC transporter, ATP-binding protein K02017; Psort location: CytoplasmicMembrane, score: 9.49.
   
 0.929
EEF69357.1
ABC transporter, ATP-binding protein; KEGG: tte:TTE0514 7.1e-83 glnQ; ABC-type polar amino acid transport system, ATPase component K02028; Psort location: CytoplasmicMembrane, score: 9.49.
    
 0.915
EEF67772.1
KEGG: sil:SPO0237 1.0e-67 upgC; SN-glycerol-3-phosphate ABC transporter, ATP-binding protein K05816; Psort location: CytoplasmicMembrane, score: 9.49.
   
 0.884
EEF67597.1
CBS domain protein; KEGG: afu:AF0847 4.0e-09 guaB-1; IMP dehydrogenase K00088.
 
    0.878
EEF68526.1
SCP-like protein; KEGG: bce:BC2506 6.0e-05 bacillolysin K01400; Psort location: Cytoplasmic, score: 8.87.
   
   0.868
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.