STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67590.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EEF69471.1
Trypsin; KEGG: lin:lin0320 1.3e-58 similar to heat-shock protein htrA serine protease.
  
 
 0.760
EEF68221.1
Trypsin; KEGG: tte:TTE2568 3.8e-61 degQ2; trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.760
EEF66686.1
Trypsin; KEGG: tte:TTE2568 2.3e-68 degQ2; trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.760
EEF68780.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.733
EEF67496.1
N-acetylmuramoyl-L-alanine amidase; KEGG: bcl:ABC0192 3.3e-30 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
    
 0.706
EEF66636.1
KEGG: tte:TTE2424 4.2e-05 amiC2; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
    
 0.689
phnD
Phosphate-import protein PhnD; Psort location: Cytoplasmic, score: 8.87.
   
    0.661
EEF67265.1
Glycosyl hydrolase family 25; KEGG: cpe:CPE0382 3.5e-15 probable autolytic lysozyme K07273; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.653
EEF67117.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.647
EEF67667.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.576
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.