STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67556.1Histidine triad domain protein; KEGG: reh:H16_A0442 2.8e-08 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01529; Psort location: Cytoplasmic, score: 8.87. (165 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.871
EEF67152.1
Hydrolase, NUDIX family; KEGG: nme:NMB1064 2.8e-17 ADP-ribose pyrophosphatase K01515; Psort location: Cytoplasmic, score: 8.87; Belongs to the Nudix hydrolase family.
 
 0.845
EEF68427.1
Putative bacteriocin transport accessory protein; KEGG: sde:Sde_2478 0.0017 cyclic nucleotide-binding domain (cNMP-BD) protein K01729.
  
 0.840
EEF65733.1
Putative bacteriocin transport accessory protein.
  
 0.840
EEF69116.1
Hydrolase, NUDIX family; KEGG: nmu:Nmul_A2233 7.2e-35 NUDIX hydrolase K01515; Psort location: Cytoplasmic, score: 8.87.
  
 0.818
EEF67557.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.773
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
   0.764
gltA
KEGG: tte:TTE0567 5.5e-131 gltD; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.747
EEF66304.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.740
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.732
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.