STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67541.1Peptidase family S51; KEGG: sco:SCO0575 2.8e-05 SC5G5.07; putative peptidase K05995; Belongs to the peptidase S51 family. (215 aa)    
Predicted Functional Partners:
EEF66052.1
Asparaginase; KEGG: lsa:LSA1693 2.3e-70 asnA2; L-asparaginase K01424.
    
 0.777
EEF69478.1
Aminotransferase, class I/II; KEGG: tte:TTE2440 5.2e-119 avtA4; PLP-dependent aminotransferases K00821; Psort location: Cytoplasmic, score: 8.87.
     
 0.712
EEF68787.1
Aminotransferase, class I/II; KEGG: yps:YPTB3432 8.1e-114 putative aminotransferase K00812; Psort location: Cytoplasmic, score: 8.87.
     
 0.712
EEF67235.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
     
 0.712
EEF67179.1
Aminotransferase, class I/II; KEGG: tte:TTE0301 1.1e-54 avtA; PLP-dependent aminotransferases; Psort location: Cytoplasmic, score: 8.87.
     
 0.712
pyrB
KEGG: gka:GK1149 5.6e-90 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.98; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
  0.709
EEF66288.1
Amino acid kinase family; KEGG: ldb:Ldb1349 2.8e-120 ask; aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
    
  0.687
EEF66078.1
Amino acid kinase family; KEGG: bca:BCE_3837 3.1e-41 dapG; aspartate kinase I K00928; Psort location: Cytoplasmic, score: 8.87.
    
  0.687
EEF67982.1
Hydrolase, carbon-nitrogen family; KEGG: lwe:lwe0750 3.1e-57 amidohydrolase, putative; Psort location: Cytoplasmic, score: 8.87.
    
  0.676
EEF66872.1
Hydrolase, carbon-nitrogen family; KEGG: sde:Sde_2553 1.8e-05 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K01950; Psort location: Cytoplasmic, score: 8.87.
    
  0.675
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.